Read the paper, Nick. CIs aren’t missing at all. No need to introduce a different method to calculate them.
All of these trends are statistically significant at the 95% level based on a p-test. Ninety-five percent confidence intervals are also provided taking into account the autocorrelation of the residuals based upon the methodology outlined by Santer et al. [2008].
The conclusion is, the difference between surface temps and satellites is largest over land areas. Possible explanations are offered aswell.
We conclude that the fact that trends in thermometerestimated surface warming over land areas have been larger than trends in the lower troposphere estimated from satellites and radiosondes is most parsimoniously explained by the first possible explanation offered by Santer et al. [2005].
Specifically, the characteristics of the divergence across the data sets are strongly suggestive that it is an artifact resulting from the data quality of the surface, satellite and/or radiosonde observations. These findings indicate that the reconciliation of differences between surface and satellite data sets [Karl et al., 2006] has not yet occurred, and we have offered a suggested reason for the continuing lack of reconciliation.